Browse of TCMCG006C105340 protein

CDS

Accession Number	TCMCG006C105340
gbkey	CDS
Protein Id	XP_013661716.1
Location	join(13931352..13931648,13931736..13931841,13931920..13932110,13932209..13932262,13932729..13932879,13932965..13933365,13933924..13934142,13934497..13934608,13935024..13935215,13935330..13935406,13935575..13935697,13935809..13935895,13936026..13936126,13936878..13936935,13937304..13937369,13937791..13937876,13937961..13938144,13938528..13938674,13938760..13938861,13938950..13939102,13939729..13939833,13940169..13940309,13940393..13940482,13940561..13940617,13940845..13940928,13941147..13941245,13941329..13941469,13941791..13941861,13942298..13942367,13942522..13942614,13942682..13942891,13943010..13943102,13943312..13943434,13943537..13943617)
Gene	LOC106366606
GeneID	106366606
Organism	Brassica napus

Protein

Length	1454aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA293435
db_source	XM_013806262.2
Definition	DExH-box ATP-dependent RNA helicase DExH7, chloroplastic [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category	A
Description	Helicase associated domain (HA2)
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	ko00000        [VIEW IN KEGG] ko01000        [VIEW IN KEGG] ko03012        [VIEW IN KEGG]
KEGG_ko	ko:K18995        [VIEW IN KEGG]
EC	3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	-
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003676        [VIEW IN EMBL-EBI] GO:0003723        [VIEW IN EMBL-EBI] GO:0003724        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004004        [VIEW IN EMBL-EBI] GO:0004386        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0006139        [VIEW IN EMBL-EBI] GO:0006396        [VIEW IN EMBL-EBI] GO:0006725        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0008026        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0008186        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0010467        [VIEW IN EMBL-EBI] GO:0016070        [VIEW IN EMBL-EBI] GO:0016462        [VIEW IN EMBL-EBI] GO:0016787        [VIEW IN EMBL-EBI] GO:0016817        [VIEW IN EMBL-EBI] GO:0016818        [VIEW IN EMBL-EBI] GO:0016887        [VIEW IN EMBL-EBI] GO:0017111        [VIEW IN EMBL-EBI] GO:0034641        [VIEW IN EMBL-EBI] GO:0042623        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046483        [VIEW IN EMBL-EBI] GO:0070035        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0090304        [VIEW IN EMBL-EBI] GO:0097159        [VIEW IN EMBL-EBI] GO:0140098        [VIEW IN EMBL-EBI] GO:1901360        [VIEW IN EMBL-EBI] GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGCTCCGAAGAAGAAACCTCAGAAGCAAAGCAACAAAGCTGCTTCTTCATCATCATCATCGTCTTCGAAAAAGAAACCTTCCTCAGGTCCTAAGCTTCAGATTTCGGCGGAGAACGAGGACCGTTTGCGACGGCTCTTGCTCAACTCCGGCCGCACCGCTCCTCCGGCTGCGGCACCTATCCACAGCGCGCTTTCCAAAAATCAGAAGGCGAAGAAACTCAATACCGTCTACGAGAAGCTCTCTTGCGAAGGATTCGTAGATGATCAGATTGAGCTCGCTCTCTCTTCTCTTAGAGATGGAGCAACGTTTGAGACTGCACTTGATTGGCTCTGCTTGAACTTACCGAGCCATGAGTTGCCGGTGAAGTTTTCTACCGGAGCTTCTCGCTTTCCTACTGGAGGTGGTTCTGTAGGTGTGATATTGACCTCAAGGGAAGATTGGAATGAGTCTTCTGACTCTTCAGTCGAGCTCAAGCAGGAGGAACCTGAAGTTTATGTTAAAGTGAAGGGGAAGCAAGATGAGGATGCTCTTCGTTCTGACCAATCATCGCAAGCTGATTGGATCCGTCAGTATATGAGAAGACAGGAAGAGGAGGAATTGGAATCTTGGGAAGATGAGGTGGATGGTGTTGGCTCCAGCAGGGAGGCATCCGGTCCGAGGGCTTTTGATGTGATTGCTAAAGAATACTATTCGGCAAGATCAGATGCTATAAAAGCAAAGGATAAGCGTGATAAAAAAGGACAAGAGCAAGCAGGCTTAGCCATTCGAAAGCTCAAGCAAGAGATAGCTGCTCTTGGAATATCTGAAGCAGCGTTAGAATCTGAATTTCAGCGTGAGTATGCTTCCGAAGATGCTACAGAAAAAGAAATAGCCTCTCCCATGCCCGATAATATTCATGAGGCAGTAGATGCTGACTCTATTCAGCCGTTAGATGAACCGGTCTTGGATGAAAATCCTATTGAGAATTGTGGATCTGAGGAAAATCAACCTAAAGATCTTCCCTCATGTTCCCCGGGACAAGAAGTAGTTGCATCGGATGATAATTCAGAGTACTTGGCGCTTGACGATATGTTTTCAGTAGATGTCCCGCATTATGAAGCATCGCCACATGAACTCTTGGAATTGCAGAAGAAGGAAAAGATGAGAGAACTACGCAGTGAGGAAAATCTCGGGAAACTAGAGGGCATCTGGAAGAAGGGTGAAGCGCAAAAGGTCCCTAAGGCATTTCTCCATCAATTGTGTCAAAGGTCGGGGTGGGACGCACCAAAGTTCAACAAAGTAACCGGCGAAGGAAGGAAAATCTCATATACTGTAAGCATTCTGCGTAAAGCCAGTGGACGGGGTAAAAGCAGACAAGCCGGGGGTCTGGTAACTCTTCAACTTCCTCATCAAGATGAGGTTTTTGAGTCTATCGAGGATGCACAAAACAGAGTTGCGGCATTTGCTCTCCATAAGCTCTTTTCTGATTTGCCTGTTCACTTTGCAATCACTGAGCCATATGCCTCTCTAGTGTTGATCTGGAAACAAGAGGAATTGTTTTGTACCGTACAAAGCACAGAAGAAGATCGAAGAGCTAACTTCGTTGATAGGTTGCTTGAGTCGGACAATTTGAGTTTGAGCGCTTCGTCGAGTGGCATCTCCGATGCAGTTCCAATGGTAGACACTTACGTCAAAGAAAAAGATGACCTAGGTGTTGCCAGATCTAACCACAGAGCTAAAAGAGACTCTTACATAGAAGCTACATGTTTATCTCTCCAACAAAAACAAGAAAACAAGAAGAAAACACGGAAGTACAAGGATATGTTGAAAACTCGAACTGCTCTTCCTATATCTGAAGTGAAGAATGACATACTGCAGCATCTGAAAGAAAGAGATGTCTTAGTAGTATGCGGAGAAACAGGCTCTGGAAAGACTACACAGGTTCCTCAATTTATATTGGATGATATGATTGAGTCAGGGCGTGGTGGATACTGTAATATCATATGCACACAACCTCGGCGAATAGCAGCTATCTCTGTTGCTCAAAGAGTTGCTGATGAGCGTTGTGAATCCTCTCCAGGCTCAGATGACTCCTTGGTTGGTTATCAAGTTCGTCTTGAAAGTGCAAGGAGTGACAAGACAAGGTTGCTGTTTTGTACTACTGGTATTCTACTGAGGAAACTCGCTGGGGATAAAACCTTGAACGATGTTACACATATTATAGTCGATGAAGTGCACGAGCGGTCTCTTTTGGGTGATTTTCTTCTCATTATTTTGAAGAGCCTGATTGAGAAGCAATCATGCGATAATACATCGCAAAGACTGAAAGTTATCCTTATGTCCGCTACTGTTGACGCAAATCTGTTCTCAAATTATTTTGCTCACTGTCCTGTGATTACTGCTCAAGGACGAACACACCCGGTTACTACTCACTTTCTGGAGGAGATTTATGAGAGCACTAGATACCTTCTGGCTCCAGATTCTCCTGCTGCACTCAGATCGGATTCATCCATTAAAGACAAGCTTGGTTCTGTAAACGACCGTAGGGGAAAGAAGAATCTTGTATTGGCTGGATGGGGGGACGATTATTTGCTTTCGGAGGACTGTCTTAACCCGTTTTATGTTTCCGGTAACTACAACTCGTACAGTGATCAAACACAACAAAATCTGAAAAGGTTAAATGAGGATGCTATTGACTATGAGCTTCTTGAAGAGTTGATATGCCACATTGACGATACTTGCAACGAGGGAGCTATTCTAGTATTTTTGCCTGGTGTGTCAGAAATTCACATGTTACTTGATAGGTTAGCTGCTTCGTATCGTTTTCGTGGACCTTCTGCAGATTGGCTTCTTCCTCTGCATTCTTCTATAGCATCTACCGAACAGAAAAGGGTGTTTCTACGACCCCCTGAAGACGTACGGAAGGTTATTATAGCTACAAACATTGCAGAGACCAGTATAACAATTGATGATGTGGTGTATGTGATTGACAGTGGCAAACACAAGGAAAATCGCTATAATCCACAGAAGAAACTGTCAAGCATGGTGGAAGATTGGATATCTCAAGCAAATGCAAGACAAAGAACAGGAAGAGCTGGACGAGTTAAACCTGGAATTTGCTATTCATTGTACACACGCCATAGGTTCGAGAAACTAATGCGTCCCTATCAGGTTCCTGAGATGCTGCGGATGCCATTAGTAGAACTATGTCTACAAATCAAATTGCTTGGTTTGGGTCACATTAAGCCTTTTCTGTCGAAGGCTTTGGAACCTCCGAGTGAAGGTGCTATAGCCTCTGCAATTTCATTGTTACACGAGGTTGGTGCTGTTGAAGGAGACGAAGAATTGACACCACTTGGGCATCATTTAGCAAAACTTCCTGTTGATGTATTGATTGGAAAGATGCTGTTGTATGGTGGAATATTTGGCTGCTTATCACCTATTCTCTCGATCGCTGCTTTCTTGAGCTACAAATCGCCATTTATATATCCCAAAGATGAGAAGCAAAATGTTGACCGGGTGAAACTTGCTCTATTTTCTGATAATATGGATAAATCAAGTGAATTAAACAACAATGACAAACAATCTGATCATCTCCTTATGATGGTTGCATACGACAAATGGGTGAAGATACTGAATGAGCGAGGAATGAAAGCTGCACAGAGGTTCTGTGAATCAAAGTTCTTGAGCAGCTCAGTGATGCGGATGATAAGAGACATGAGAGTACAATATGGGACATTACTGGCAGACATCGGGCTCATCAATCTTCCGAAAACAGGAGAGTTTGCAGGGAGGAAAAAGGAGAATCTTGATGTCTGGTTTTCTGACCAAACTCAACCTTTCAATATGTATTCACAACAACCTGAAGTTGTTAAGGCTATACTATGCGCAGGACTATATCCTAATATTGCAGCTAATGATAAGGGAATTACAGAGACAGCGGTTAACAGTTTGACAAAGCAAGGGAACCAAACAAAGAGTTATTCAGCGTGGTACGATGGCAGAAGGGAAGTCTATATCCATCCGTCCTCTATTAACAGCAACTTCAAAGCATTTCAGTACCCTTTCCTTGTATTCCTTGAGAAGGTTGAAACGAACAAAGTGTATCTGCGTGATACAACCATTGTTTCTCCTTTCTCCATTCTTCTTTTTGGCGGCTCAATCAATGTTCATCATCAGAGTGGATCAGTCACCATTGATGGGTGGTTGAAGATAGCAGCACCAGCACAAACTGCAGTTTTGTTCAAAGAGCTTCGGTTAACCCTACATTCTATCCTAAAAGATCTTATCCGGAAACCCGAGATATCAGGGATAGTCCACAACGAGGTGGTCAAATATATGGTCCATCTTCTTATAGAAGAAGGCAAACCGCAACACACTTGA

Protein:   MAPKKKPQKQSNKAASSSSSSSSKKKPSSGPKLQISAENEDRLRRLLLNSGRTAPPAAAPIHSALSKNQKAKKLNTVYEKLSCEGFVDDQIELALSSLRDGATFETALDWLCLNLPSHELPVKFSTGASRFPTGGGSVGVILTSREDWNESSDSSVELKQEEPEVYVKVKGKQDEDALRSDQSSQADWIRQYMRRQEEEELESWEDEVDGVGSSREASGPRAFDVIAKEYYSARSDAIKAKDKRDKKGQEQAGLAIRKLKQEIAALGISEAALESEFQREYASEDATEKEIASPMPDNIHEAVDADSIQPLDEPVLDENPIENCGSEENQPKDLPSCSPGQEVVASDDNSEYLALDDMFSVDVPHYEASPHELLELQKKEKMRELRSEENLGKLEGIWKKGEAQKVPKAFLHQLCQRSGWDAPKFNKVTGEGRKISYTVSILRKASGRGKSRQAGGLVTLQLPHQDEVFESIEDAQNRVAAFALHKLFSDLPVHFAITEPYASLVLIWKQEELFCTVQSTEEDRRANFVDRLLESDNLSLSASSSGISDAVPMVDTYVKEKDDLGVARSNHRAKRDSYIEATCLSLQQKQENKKKTRKYKDMLKTRTALPISEVKNDILQHLKERDVLVVCGETGSGKTTQVPQFILDDMIESGRGGYCNIICTQPRRIAAISVAQRVADERCESSPGSDDSLVGYQVRLESARSDKTRLLFCTTGILLRKLAGDKTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSQRLKVILMSATVDANLFSNYFAHCPVITAQGRTHPVTTHFLEEIYESTRYLLAPDSPAALRSDSSIKDKLGSVNDRRGKKNLVLAGWGDDYLLSEDCLNPFYVSGNYNSYSDQTQQNLKRLNEDAIDYELLEELICHIDDTCNEGAILVFLPGVSEIHMLLDRLAASYRFRGPSADWLLPLHSSIASTEQKRVFLRPPEDVRKVIIATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRVKPGICYSLYTRHRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSKALEPPSEGAIASAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSPILSIAAFLSYKSPFIYPKDEKQNVDRVKLALFSDNMDKSSELNNNDKQSDHLLMMVAYDKWVKILNERGMKAAQRFCESKFLSSSVMRMIRDMRVQYGTLLADIGLINLPKTGEFAGRKKENLDVWFSDQTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETAVNSLTKQGNQTKSYSAWYDGRREVYIHPSSINSNFKAFQYPFLVFLEKVETNKVYLRDTTIVSPFSILLFGGSINVHHQSGSVTIDGWLKIAAPAQTAVLFKELRLTLHSILKDLIRKPEISGIVHNEVVKYMVHLLIEEGKPQHT